PH01000062G1720's details annotation
1.Annotation
ICBR annotation: rho GDP-dissociation inhibitor 1, putative, expressed
Blast result AT3G07880 : 2.30E-82
Blast annotation: Immunoglobulin E-set superfamily protein
2.Location
Scaffold: PH01000062
Strand: +
| Region | Start | End |
| gene | 1165743 | 1169691 |
| mRNA | 1165743 | 1169691 |
| exon | 1165743 | 1167070 |
| exon | 1167461 | 1167527 |
| exon | 1168309 | 1168527 |
| exon | 1168618 | 1168742 |
| exon | 1168843 | 1169691 |
| CDS | 1166798 | 1167070 |
| CDS | 1167461 | 1167527 |
| CDS | 1168309 | 1168527 |
| CDS | 1168618 | 1168742 |
| CDS | 1168843 | 1168920 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02115.16 | Rho_GDI | 62 | 249 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005094 | Rho GDP-dissociation inhibitor activity |
| GO:0005737 | cytoplasm |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.