PH01000063G0270's details annotation
1.Annotation
ICBR annotation: POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed
Blast result AT5G13140 : 5.10E-33
Blast annotation: Pollen Ole e 1 allergen and extensin family protein
2.Location
Scaffold: PH01000063
Strand: -
| Region | Start | End |
| gene | 212127 | 215071 |
| mRNA | 212127 | 215071 |
| exon | 212127 | 213051 |
| exon | 214344 | 215071 |
| CDS | 212405 | 213051 |
| CDS | 214344 | 214515 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000322 | Endocytosis protein refolding, vesicle docking involved in exocytosis, nucleus, |
| coexpression network | CFinderM000440 | Endocytosis cell wall, apoplast, xyloglucan:xyloglucosyl transferase activity, cellular glucan metabolic process, vesicle docking involved in exocytosis, serine-type carboxypeptidase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01190.16 | Pollen_Ole_e_I | 35 | 129 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.