PH01000063G1550's details annotation
1.Annotation
ICBR annotation: ankyrin repeat domain containing protein, putative, expressed
Blast result AT4G35450 : 1.00E-108
Blast annotation: ankyrin repeat-containing protein 2
2.Location
Scaffold: PH01000063
Strand: +
| Region | Start | End |
| gene | 1037830 | 1043210 |
| mRNA | 1037830 | 1043210 |
| exon | 1037830 | 1037979 |
| exon | 1038739 | 1038857 |
| exon | 1039018 | 1039227 |
| exon | 1039312 | 1039460 |
| exon | 1040347 | 1040448 |
| exon | 1040520 | 1040691 |
| exon | 1041310 | 1041402 |
| exon | 1042043 | 1042182 |
| exon | 1042265 | 1043210 |
| CDS | 1037970 | 1037979 |
| CDS | 1038739 | 1038857 |
| CDS | 1039018 | 1039227 |
| CDS | 1039312 | 1039460 |
| CDS | 1040347 | 1040448 |
| CDS | 1040520 | 1040691 |
| CDS | 1041310 | 1041402 |
| CDS | 1042043 | 1042182 |
| CDS | 1042265 | 1042364 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12796.6 | Ank_2 | 212 | 302 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.