PH01000068G0590's details annotation
1.Annotation
ICBR annotation: POK1, putative, expressed
Blast result AT3G17360 : 4.00E-112
Blast annotation: phragmoplast orienting kinesin 1
2.Location
Scaffold: PH01000068
Strand: +
| Region | Start | End |
| gene | 390992 | 404228 |
| mRNA | 390992 | 404228 |
| exon | 390992 | 391312 |
| exon | 392205 | 392208 |
| exon | 392284 | 392413 |
| exon | 392509 | 392946 |
| exon | 393135 | 393383 |
| exon | 393817 | 394473 |
| exon | 395954 | 397849 |
| exon | 397919 | 398026 |
| exon | 398358 | 398509 |
| exon | 398598 | 398685 |
| exon | 398769 | 398843 |
| exon | 398930 | 399166 |
| exon | 402729 | 402827 |
| exon | 402921 | 402995 |
| exon | 403081 | 403139 |
| exon | 403289 | 403400 |
| exon | 403528 | 403608 |
| exon | 403686 | 404228 |
| CDS | 391213 | 391312 |
| CDS | 392205 | 392208 |
| CDS | 392284 | 392413 |
| CDS | 392509 | 392946 |
| CDS | 393135 | 393383 |
| CDS | 393817 | 394473 |
| CDS | 395954 | 397849 |
| CDS | 397919 | 398026 |
| CDS | 398358 | 398509 |
| CDS | 398598 | 398685 |
| CDS | 398769 | 398843 |
| CDS | 398930 | 399166 |
| CDS | 402729 | 402827 |
| CDS | 402921 | 402995 |
| CDS | 403081 | 403139 |
| CDS | 403289 | 403400 |
| CDS | 403528 | 403608 |
| CDS | 403686 | 403826 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.