PH01000068G1140's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G08810 : 6.00E-175
Blast annotation: calcium ion binding
2.Location
Scaffold: PH01000068
Strand: +
| Region | Start | End |
| gene | 758054 | 764912 |
| mRNA | 758054 | 764912 |
| exon | 758054 | 760229 |
| exon | 761348 | 761382 |
| exon | 762734 | 762815 |
| exon | 763467 | 763526 |
| exon | 763837 | 764912 |
| CDS | 758565 | 760229 |
| CDS | 761348 | 761382 |
| CDS | 762734 | 762815 |
| CDS | 763467 | 763526 |
| CDS | 763837 | 763965 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000975 | GTnc GlycosylTransferases tRNA (guanine-N1-)-methyltransferase activity, tRNA methylation, chitin catabolic process, cell wall macromolecule catabolic process, chaperone binding, chitinase activity, transferase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 290 | 520 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.