PH01000068G1150's details annotation
1.Annotation
ICBR annotation: calmodulin-binding protein, putative, expressed
Blast result AT3G13600 : 5.00E-162
Blast annotation: calmodulin-binding family protein
2.Location
Scaffold: PH01000068
Strand: -
| Region | Start | End |
| gene | 765142 | 768273 |
| mRNA | 765142 | 768273 |
| exon | 765142 | 765841 |
| exon | 765936 | 766037 |
| exon | 766156 | 766248 |
| exon | 766375 | 766521 |
| exon | 766612 | 766702 |
| exon | 766798 | 766886 |
| exon | 766980 | 767045 |
| exon | 767153 | 767267 |
| exon | 767373 | 768273 |
| CDS | 765209 | 765841 |
| CDS | 765936 | 766037 |
| CDS | 766156 | 766248 |
| CDS | 766375 | 766521 |
| CDS | 766612 | 766702 |
| CDS | 766798 | 766886 |
| CDS | 766980 | 767045 |
| CDS | 767153 | 767267 |
| CDS | 767373 | 767779 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.