PH01000068G1390's details annotation
1.Annotation
ICBR annotation: DCN1, putative, expressed
Blast result AT3G28970 : 6.00E-46
Blast annotation: Domain of unknown function (DUF298)
2.Location
Scaffold: PH01000068
Strand: +
| Region | Start | End |
| gene | 944070 | 948503 |
| mRNA | 944070 | 948503 |
| exon | 944070 | 944976 |
| exon | 945599 | 945683 |
| exon | 946300 | 946348 |
| exon | 946431 | 946506 |
| exon | 946604 | 946686 |
| exon | 947581 | 947677 |
| exon | 947813 | 947858 |
| exon | 948060 | 948503 |
| CDS | 944892 | 944976 |
| CDS | 945599 | 945683 |
| CDS | 946300 | 946348 |
| CDS | 946431 | 946506 |
| CDS | 946604 | 946686 |
| CDS | 947581 | 947677 |
| CDS | 947813 | 947858 |
| CDS | 948060 | 948225 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03556.14 | Cullin_binding | 74 | 171 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.