PH01000068G1830's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G10020 : 0.00E+00
Blast annotation: Leucine-rich receptor-like protein kinase family protein
2.Location
Scaffold: PH01000068
Strand: +
| Region | Start | End |
| gene | 1318265 | 1327382 |
| mRNA | 1318265 | 1327382 |
| exon | 1318265 | 1320159 |
| exon | 1321114 | 1322787 |
| exon | 1323000 | 1323576 |
| exon | 1324552 | 1324702 |
| exon | 1325072 | 1325106 |
| exon | 1325594 | 1325801 |
| exon | 1326394 | 1327382 |
| CDS | 1319517 | 1320159 |
| CDS | 1321114 | 1322787 |
| CDS | 1323000 | 1323576 |
| CDS | 1324552 | 1324702 |
| CDS | 1325072 | 1325106 |
| CDS | 1325594 | 1325801 |
| CDS | 1326394 | 1326489 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 688 | 918 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.