PH01000069G0020's details annotation
1.Annotation
ICBR annotation: RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed
Blast result AT2G24490 : 6.50E-18
Blast annotation: replicon protein A2
2.Location
Scaffold: PH01000069
Strand: +
| Region | Start | End |
| gene | 14213 | 18910 |
| mRNA | 14213 | 18910 |
| exon | 14213 | 15087 |
| exon | 15173 | 15214 |
| exon | 15309 | 15386 |
| exon | 16614 | 16692 |
| exon | 17387 | 17469 |
| exon | 18625 | 18910 |
| CDS | 15017 | 15087 |
| CDS | 15173 | 15214 |
| CDS | 15309 | 15386 |
| CDS | 16614 | 16692 |
| CDS | 17387 | 17469 |
| CDS | 18625 | 18709 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.