PH01000069G1070's details annotation
1.Annotation
ICBR annotation: growth regulator related protein, putative, expressed
Blast result AT3G26370 : 0.00E+00
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01000069
Strand: +
| Region | Start | End |
| gene | 772643 | 778719 |
| mRNA | 772643 | 778719 |
| exon | 772643 | 773252 |
| exon | 774651 | 774739 |
| exon | 774867 | 774986 |
| exon | 776019 | 776042 |
| exon | 777171 | 777287 |
| exon | 777389 | 777532 |
| exon | 777621 | 777717 |
| exon | 777835 | 778026 |
| exon | 778221 | 778719 |
| CDS | 772920 | 773252 |
| CDS | 774651 | 774739 |
| CDS | 774867 | 774986 |
| CDS | 776019 | 776042 |
| CDS | 777171 | 777287 |
| CDS | 777389 | 777532 |
| CDS | 777621 | 777717 |
| CDS | 777835 | 778026 |
| CDS | 778221 | 778583 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001085 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 112 | 427 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.