PH01000070G0450's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G20970 : 5.50E-70
Blast annotation: -
2.Location
Scaffold: PH01000070
Strand: +
| Region | Start | End |
| gene | 270451 | 278584 |
| mRNA | 270451 | 278584 |
| exon | 270451 | 273975 |
| exon | 274099 | 274391 |
| exon | 274467 | 274625 |
| exon | 274743 | 274922 |
| exon | 275005 | 275199 |
| exon | 275760 | 275858 |
| exon | 276393 | 277022 |
| exon | 277140 | 278584 |
| CDS | 271308 | 273975 |
| CDS | 274099 | 274391 |
| CDS | 274467 | 274625 |
| CDS | 274743 | 274922 |
| CDS | 275005 | 275199 |
| CDS | 275760 | 275858 |
| CDS | 276393 | 277022 |
| CDS | 277140 | 277490 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.