PH01000072G1010's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G08800 : 4.80E-32
Blast annotation: Protein of unknown function, DUF593
2.Location
Scaffold: PH01000072
Strand: +
| Region | Start | End |
| gene | 756405 | 763422 |
| mRNA | 756405 | 763422 |
| exon | 756405 | 756857 |
| exon | 757930 | 758997 |
| exon | 759656 | 759823 |
| exon | 759905 | 759991 |
| exon | 760145 | 760309 |
| exon | 760388 | 763422 |
| CDS | 756719 | 756857 |
| CDS | 757930 | 758997 |
| CDS | 759656 | 759823 |
| CDS | 759905 | 759991 |
| CDS | 760145 | 760309 |
| CDS | 760388 | 761646 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04576.14 | Zein-binding | 697 | 787 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.