PH01000077G0570's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G13370 : 4.00E-118
Blast annotation: Plant protein of unknown function (DUF936)
2.Location
Scaffold: PH01000077
Strand: -
| Region | Start | End |
| gene | 338326 | 345411 |
| mRNA | 338326 | 345411 |
| exon | 338326 | 339674 |
| exon | 339776 | 339879 |
| exon | 342305 | 342520 |
| exon | 343131 | 345411 |
| CDS | 338960 | 339674 |
| CDS | 339776 | 339879 |
| CDS | 342305 | 342520 |
| CDS | 343131 | 344210 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06075.11 | DUF936 | 5 | 696 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.