PH01000080G1350's details annotation
1.Annotation
ICBR annotation: annexin, putative, expressed
Blast result AT5G65020 : 7.00E-109
Blast annotation: annexin 2
2.Location
Scaffold: PH01000080
Strand: +
| Region | Start | End |
| gene | 902517 | 907436 |
| mRNA | 902517 | 907436 |
| exon | 902517 | 904321 |
| exon | 904448 | 904593 |
| exon | 904741 | 904959 |
| exon | 905779 | 905991 |
| exon | 907099 | 907436 |
| CDS | 904246 | 904321 |
| CDS | 904448 | 904593 |
| CDS | 904741 | 904959 |
| CDS | 905779 | 905991 |
| CDS | 907099 | 907389 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00191.19 | Annexin | 16 | 78 |
| PF00191.19 | Annexin | 88 | 152 |
| PF00191.19 | Annexin | 171 | 234 |
| PF00191.19 | Annexin | 246 | 310 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005509 | calcium ion binding |
| GO:0005544 | calcium-dependent phospholipid binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.