PH01000081G1840's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G05320 : 4.70E-98
Blast annotation: FAD/NAD(P)-binding oxidoreductase family protein
2.Location
Scaffold: PH01000081
Strand: -
| Region | Start | End |
| gene | 1095309 | 1097271 |
| mRNA | 1095309 | 1097271 |
| exon | 1095309 | 1095955 |
| exon | 1096053 | 1096281 |
| exon | 1096384 | 1096549 |
| exon | 1096681 | 1096749 |
| exon | 1097122 | 1097271 |
| CDS | 1095420 | 1095955 |
| CDS | 1096053 | 1096281 |
| CDS | 1096384 | 1096549 |
| CDS | 1096681 | 1096749 |
| CDS | 1097122 | 1097204 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01494.18 | FAD_binding_3 | 9 | 343 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016491 | oxidoreductase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.