PH01000082G1810's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G37440 : 1.40E-22
Blast annotation: -
2.Location
Scaffold: PH01000082
Strand: -
| Region | Start | End |
| gene | 1226437 | 1232627 |
| mRNA | 1226437 | 1232627 |
| exon | 1226437 | 1228730 |
| exon | 1229276 | 1229790 |
| exon | 1230555 | 1230617 |
| exon | 1230744 | 1231057 |
| exon | 1231551 | 1232627 |
| CDS | 1228317 | 1228730 |
| CDS | 1229276 | 1229790 |
| CDS | 1230555 | 1230617 |
| CDS | 1230744 | 1231057 |
| CDS | 1231551 | 1231912 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.