PH01000083G0040's details annotation
1.Annotation
ICBR annotation: methyltransferase, putative, expressed
Blast result AT4G10440 : 0
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01000083
Strand: -
| Region | Start | End |
| gene | 18760 | 21684 |
| mRNA | 18760 | 21684 |
| exon | 18760 | 19334 |
| exon | 19641 | 20105 |
| exon | 20267 | 20564 |
| exon | 20669 | 20921 |
| exon | 20967 | 21684 |
| CDS | 19109 | 19334 |
| CDS | 19641 | 20105 |
| CDS | 20267 | 20564 |
| CDS | 20669 | 20921 |
| CDS | 20967 | 21653 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001056 | RLK-Pelle_LRR-III (from iTAK) RLK-Pelle_URK-1 (from iTAK) protein phosphorylation, transferase activity, transferring phosphorus-containing groups, protein kinase activity, ATP binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03141.15 | Methyltransf_29 | 107 | 631 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.