Gene details

Annotation of co-expression genes

PH01000083G1490's details annotation

1.Annotation

ICBR annotation: superoxide dismutase, chloroplast, putative, expressed

Blast result AT5G51100 : 3.10E-72
Blast annotation: Fe superoxide dismutase 2

2.Location

Scaffold: PH01000083
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000548	superoxide dismutase activity, superoxide metabolic process, Peroxisome Aminoacyl-tRNA_biosynthesis carbon-nitrogen ligase activity, with glutamine as amido-N-donor,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Peroxisome	superoxide dismutase, Fe-Mn family [EC:1.15.1.1]	ko04146	K04564

10.Gene Ontology

GO Accession	GO Annotation
GO:0004784	superoxide dismutase activity
GO:0006801	superoxide metabolic process
GO:0046872	metal ion binding
GO:0055114	oxidation-reduction process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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