Gene details

Annotation of co-expression genes

PH01000084G0760's details annotation

1.Annotation

ICBR annotation: proteasome/cyclosome repeat containing protein, expressed

Blast result AT2G32730 : 0.00E+00
Blast annotation: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit

2.Location

Scaffold: PH01000084
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000650	proteasome complex, Golgi_transport_complex regulation of protein catabolic process, cell death, binding, enzyme regulator activity, RNA metabolic process,
coexpression network	CFinderM001081	proteasome complex, regulation of protein catabolic process, enzyme regulator activity, Rcd1-like Transcription_Regulator(from iTAK) Proteasome binding, transcription factor TFIID complex, glycyl-tRNA aminoacylation, RLK-Pelle_LRR-XII-1 (from iTAK) glycine-tRNA ligase activity,
coexpression network	CFinderM001258	proteasome complex, regulation of protein catabolic process, enzyme regulator activity, Proteasome RNA_degradation
coexpression network	CFinderM001370	proteasome complex, regulation of protein catabolic process, enzyme regulator activity, Proteasome binding, small protein activating enzyme activity, RNA metabolic process, cellular protein modification process,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Proteasome	26S proteasome regulatory subunit N2	ko03051	K03032

10.Gene Ontology

GO Accession	GO Annotation
GO:0000502	proteasome complex
GO:0005488	binding
GO:0030234	enzyme regulator activity
GO:0042176	regulation of protein catabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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