Gene details

Annotation of co-expression genes

PH01000084G1400's details annotation

1.Annotation

ICBR annotation: 26S proteasome non-ATPase regulatory subunit 8, putative, expressed

Blast result AT1G64520 : 3.50E-83
Blast annotation: regulatory particle non-ATPase 12A

2.Location

Scaffold: PH01000084
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000868	proteasome_regulatory_particle Peroxisome Proteasome Fatty_acid_metabolism
coexpression network	CFinderM000991	cation:chloride_symporter_activity proteasome_regulatory_particle Proteasome microtubule binding, cytokinesis ion transport, microtubule cytoskeleton organization,
coexpression network	CFinderM000992	cation:chloride_symporter_activity proteasome_regulatory_particle microtubule binding, Proteasome ion transport, cytokinesis microtubule cytoskeleton organization,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF10075.8	CSN8_PSD8_EIF3K	108	243

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Proteasome	26S proteasome regulatory subunit N12	ko03051	K03031

10.Gene Ontology

GO Accession	GO Annotation
GO:0005838	proteasome regulatory particle
GO:0006508	proteolysis

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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