PH01000086G0640's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G45150 : 4.90E-59
Blast annotation: -
2.Location
Scaffold: PH01000086
Strand: -
| Region | Start | End |
| gene | 447133 | 452317 |
| mRNA | 447133 | 452317 |
| exon | 447133 | 447389 |
| exon | 447513 | 447582 |
| exon | 448451 | 448588 |
| exon | 448994 | 449021 |
| exon | 449973 | 449983 |
| exon | 450258 | 450431 |
| exon | 450851 | 450889 |
| exon | 451276 | 451348 |
| exon | 451977 | 452317 |
| CDS | 447334 | 447389 |
| CDS | 447513 | 447582 |
| CDS | 448451 | 448588 |
| CDS | 448994 | 449021 |
| CDS | 449973 | 449983 |
| CDS | 450258 | 450431 |
| CDS | 450851 | 450889 |
| CDS | 451276 | 451348 |
| CDS | 451977 | 451981 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.