PH01000086G0840's details annotation
1.Annotation
ICBR annotation: BES1/BZR1 homolog protein, putative, expressed
Blast result AT1G19350 : 1.80E-57
Blast annotation: Brassinosteroid signalling positive regulator (BZR1) family protein
2.Location
Scaffold: PH01000086
Strand: +
| Region | Start | End |
| gene | 580693 | 583233 |
| mRNA | 580693 | 583233 |
| exon | 580693 | 580997 |
| exon | 581117 | 583233 |
| CDS | 580800 | 580997 |
| CDS | 581117 | 581800 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | BES1 |
| Transcription_Regulator(from PlantTFDB) | BES1 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05687.12 | BES1_N | 1 | 124 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Plant hormone signal transduction | brassinosteroid resistant 1/2 | ko04075 | K14503 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.