PH01000087G0040's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G20740 : 1.20E-42
Blast annotation: Tetraspanin family protein
2.Location
Scaffold: PH01000087
Strand: +
| Region | Start | End |
| gene | 18355 | 23159 |
| mRNA | 18355 | 23159 |
| exon | 18355 | 19835 |
| exon | 21689 | 21771 |
| exon | 22177 | 22220 |
| exon | 22310 | 22414 |
| exon | 22867 | 23059 |
| exon | 23153 | 23159 |
| CDS | 19750 | 19835 |
| CDS | 21689 | 21771 |
| CDS | 22177 | 22220 |
| CDS | 22310 | 22414 |
| CDS | 22867 | 23059 |
| CDS | 23153 | 23157 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.