PH01000088G0470's details annotation
1.Annotation
ICBR annotation: cytokinin-O-glucosyltransferase 2, putative, expressed
Blast result AT1G22380 : 2.00E-119
Blast annotation: UDP-glucosyl transferase 85A3
2.Location
Scaffold: PH01000088
Strand: -
| Region | Start | End |
| gene | 427248 | 431725 |
| mRNA | 427248 | 431725 |
| exon | 427248 | 429535 |
| exon | 430009 | 430714 |
| exon | 431074 | 431725 |
| CDS | 429143 | 429535 |
| CDS | 430009 | 430714 |
| CDS | 431074 | 431435 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000350 | spermine biosynthetic process, spermidine biosynthetic process, adenosylmethionine decarboxylase activity, NAC Transcription_Regulator(from PlantTFDB) Arginine_and_proline_metabolism Cysteine_and_methionine_metabolism Ubiquitin_mediated_proteolysis |
| coexpression network | CFinderM000351 | katanin_complex SAGA-type_complex |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00201.17 | UDPGT | 358 | 427 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.