PH01000096G0870's details annotation
1.Annotation
ICBR annotation: peptidase, putative, expressed
Blast result AT1G67420 : 7.30E-90
Blast annotation: Zn-dependent exopeptidases superfamily protein
2.Location
Scaffold: PH01000096
Strand: +
| Region | Start | End |
| gene | 632645 | 641187 |
| mRNA | 632645 | 641187 |
| exon | 632645 | 633220 |
| exon | 635292 | 635377 |
| exon | 635684 | 635905 |
| exon | 636426 | 636586 |
| exon | 638830 | 638987 |
| exon | 639096 | 639178 |
| exon | 639269 | 639354 |
| exon | 639813 | 641187 |
| CDS | 633129 | 633220 |
| CDS | 635292 | 635377 |
| CDS | 635684 | 635905 |
| CDS | 636426 | 636586 |
| CDS | 638830 | 638987 |
| CDS | 639096 | 639178 |
| CDS | 639269 | 639354 |
| CDS | 639813 | 639956 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.