PH01000096G1780's details annotation
1.Annotation
ICBR annotation: prefoldin, putative, expressed
Blast result AT5G48660 : 2.90E-33
Blast annotation: B-cell receptor-associated protein 31-like
2.Location
Scaffold: PH01000096
Strand: +
| Region | Start | End |
| gene | 1176676 | 1181046 |
| mRNA | 1176676 | 1181046 |
| exon | 1176676 | 1179975 |
| exon | 1180415 | 1180478 |
| exon | 1181016 | 1181046 |
| CDS | 1179690 | 1179975 |
| CDS | 1180415 | 1180478 |
| CDS | 1181016 | 1181040 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Protein processing in endoplasmic reticulum | B-cell receptor-associated protein 31 | ko04141 | K14009 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005783 | endoplasmic reticulum |
| GO:0006886 | intracellular protein transport |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.