PH01000098G1330's details annotation
1.Annotation
ICBR annotation: phosphatidylinositolglycan-related, putative, expressed
Blast result AT4G35530 : 9.00E-33
Blast annotation: phosphatidylinositolglycan-related
2.Location
Scaffold: PH01000098
Strand: +
| Region | Start | End |
| gene | 767593 | 769558 |
| mRNA | 767593 | 769558 |
| exon | 767593 | 767990 |
| exon | 768271 | 768355 |
| exon | 768546 | 768600 |
| exon | 768956 | 769094 |
| exon | 769128 | 769558 |
| CDS | 767817 | 767990 |
| CDS | 768271 | 768355 |
| CDS | 768546 | 768600 |
| CDS | 768956 | 769094 |
| CDS | 769128 | 769328 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10181.8 | PIG-H | 88 | 151 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | phosphatidylinositol glycan, class H | ko00563 | K03858 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0017176 | phosphatidylinositol N-acetylglucosaminyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.