Gene details

Annotation of co-expression genes

PH01000101G0310's details annotation

1.Annotation

ICBR annotation: MATE efflux protein, putative, expressed

Blast result AT1G51340 : 8.00E-117
Blast annotation: MATE efflux family protein

2.Location

Scaffold: PH01000101
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000460	drug transmembrane transport, MYB Transcription_Regulator(from PlantTFDB)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01554.17	MatE	201	293

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0006855	drug transmembrane transport
GO:0015238	drug transmembrane transporter activity
GO:0015297	antiporter activity
GO:0016020	membrane
GO:0055085	transmembrane transport

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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