Gene details

Annotation of co-expression genes

PH01000105G1210's details annotation

1.Annotation

ICBR annotation: LSTK-1-like kinase, putative, expressed

Blast result AT3G04810 : 3.00E-149
Blast annotation: NIMA-related kinase 2

2.Location

Scaffold: PH01000105
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001057	RLK-Pelle_URK-1 (from iTAK) NEK (from iTAK) chromatin silencing at telomere, chromatin modification, histone acetylation,
coexpression network	CFinderM001058	RLK-Pelle_URK-1 (from iTAK) NEK (from iTAK)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00069.24	Pkinase	4	215

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0004672	protein kinase activity
GO:0004674	protein serine/threonine kinase activity
GO:0005524	ATP binding
GO:0006468	protein phosphorylation
GO:0016772	transferase activity, transferring phosphorus-containing groups

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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