PH01000107G1650's details annotation
1.Annotation
ICBR annotation: CBS domain containing protein, expressed
Blast result AT1G47330 : 3.50E-29
Blast annotation: CBS domain-containing protein with a domain of unknown function (DUF21)
2.Location
Scaffold: PH01000107
Strand: +
| Region | Start | End |
| gene | 1120597 | 1125897 |
| mRNA | 1120597 | 1125897 |
| exon | 1120597 | 1122034 |
| exon | 1122202 | 1122806 |
| exon | 1122836 | 1123224 |
| exon | 1123641 | 1123807 |
| exon | 1123993 | 1124198 |
| exon | 1124580 | 1124626 |
| exon | 1124713 | 1124965 |
| exon | 1125109 | 1125897 |
| CDS | 1121656 | 1122034 |
| CDS | 1122202 | 1122806 |
| CDS | 1122836 | 1123224 |
| CDS | 1123641 | 1123807 |
| CDS | 1123993 | 1124198 |
| CDS | 1124580 | 1124626 |
| CDS | 1124713 | 1124965 |
| CDS | 1125109 | 1125156 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.