PH01000109G0780's details annotation
1.Annotation
ICBR annotation: histidine acid phosphatase, putative, expressed
Blast result AT3G01310 : 2.70E-56
Blast annotation: Phosphoglycerate mutase-like family protein
2.Location
Scaffold: PH01000109
Strand: -
| Region | Start | End |
| gene | 526059 | 530306 |
| mRNA | 526059 | 530306 |
| exon | 526059 | 526636 |
| exon | 526846 | 526968 |
| exon | 527387 | 527461 |
| exon | 528539 | 528621 |
| exon | 529542 | 530306 |
| CDS | 526331 | 526636 |
| CDS | 526846 | 526968 |
| CDS | 527387 | 527461 |
| CDS | 528539 | 528621 |
| CDS | 529542 | 529608 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00328.21 | His_Phos_2 | 26 | 197 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003993 | acid phosphatase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.