Annotation of co-expression genes

PH01000111G0650's details annotation

1.Annotation

ICBR annotation: DUF803 domain containing, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000111
Strand: -

RegionStartEnd
gene462217463503
mRNA462217463503
exon462217463503
CDS462652463122

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000047isomerase activity,
Brassinosteroid_biosynthesis
carbohydrate metabolic process,
carbohydrate binding,

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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