PH01000117G0080's details annotation
1.Annotation
ICBR annotation: protein kinase domain containing protein, expressed
Blast result AT3G21630 : 1.80E-38
Blast annotation: chitin elicitor receptor kinase 1
2.Location
Scaffold: PH01000117
Strand: -
| Region | Start | End |
| gene | 36105 | 38735 |
| mRNA | 36105 | 38735 |
| exon | 36105 | 36628 |
| exon | 36982 | 37018 |
| exon | 37661 | 38735 |
| CDS | 36448 | 36628 |
| CDS | 36982 | 37018 |
| CDS | 37661 | 38312 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000600 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, trehalose biosynthetic process, nitrogen compound metabolic process, |
| coexpression network | CFinderM000601 | CMGC_Pl-Tthe (from iTAK) trehalose biosynthetic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.