PH01000117G0090's details annotation 1.Annotation ICBR annotation: plant protein of unknown function domain containing protein, expressed
Blast result AT2G36430 : 4.20E-50 Blast annotation: Plant protein of unknown function (DUF247) 2.Location Scaffold: PH01000117 Strand: - Region | Start | End | gene | 39557 | 41467 | mRNA | 39557 | 41467 | exon | 39557 | 41467 | CDS | 39719 | 41308 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000016 | protein phosphorylation, protein kinase activity, transferase activity, transferring phosphorus-containing groups, protein serine/threonine kinase activity, ATP binding, RLK-Pelle_LRR-XII-1 (from iTAK) RLK-Pelle_DLSV (from iTAK) RLK-Pelle_WAK (from iTAK) ADP_binding polysaccharide_binding transmembrane_transporter_activity WRKY Transcription_Regulator(from PlantTFDB) recognition of pollen, transmembrane transport, defense response, RLK-Pelle_L-LEC (from iTAK) membrane, integral to membrane, RLK-Pelle_SD-2b (from iTAK) RLK-Pelle_WAK_LRK10L-1 (from iTAK) ATPase activity, substrate-specific transmembrane transporter activity, RLK-Pelle_LRR-XI-1 (from iTAK) 6-phosphofructokinase complex,
| coexpression network | CFinderM000084 | cell wall macromolecule catabolic process, chitin catabolic process, WRKY Transcription_Regulator(from PlantTFDB) defense response to fungus, ammonium_transport ammonium_transmembrane_transport defense response to bacterium, metabolic process, chitinase activity,
| coexpression network | CFinderM000160 | RLK-Pelle_LRK10L-2 (from iTAK) SNARE_interactions_in_vesicular_transport transport, cell wall macromolecule catabolic process, chitin catabolic process, transmembrane transport,
| coexpression network | CFinderM000199 | RLK-Pelle_LRR-VIII-1 (from iTAK)
| coexpression network | CFinderM000213 | RLK-Pelle_RLCK-II (from iTAK) GH17 Glycoside_Hydrolases extracellular region, ammonia-lyase activity,
|
5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF03140.14 | DUF247 | 130 | 518 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | null | null |
|