Gene details

Annotation of co-expression genes

PH01000118G0760's details annotation

1.Annotation

ICBR annotation: Spc97 / Spc98 family protein, putative, expressed

Blast result AT5G17410 : 0.00E+00
Blast annotation: Spc97 / Spc98 family of spindle pole body (SBP) component

2.Location

Scaffold: PH01000118
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001331	protein dephosphorylation, microtubule organizing center, spindle pole, dephosphorylation, microtubule cytoskeleton organization, C2H2 Transcription_Regulator(from PlantTFDB) isoprenoid biosynthetic process, selenium binding,
coexpression network	CFinderM001752	spindle pole, microtubule organizing center, STE_STE11 (from iTAK) microtubule cytoskeleton organization, mRNA_surveillance_pathway
coexpression network	CFinderM001825	GT66 GlycosylTransferases cation:chloride_symporter_activity oligosaccharyl transferase activity, spindle pole, microtubule organizing center, microtubule cytoskeleton organization, ion transport,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF04130.12	Spc97_Spc98	64	546

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000226	microtubule cytoskeleton organization
GO:0000922	spindle pole
GO:0005815	microtubule organizing center

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.