PH01000119G0860's details annotation
1.Annotation
ICBR annotation: integral membrane transporter family protein, putative, expressed
Blast result AT5G25050 : 1.00E-105
Blast annotation: Major facilitator superfamily protein
2.Location
Scaffold: PH01000119
Strand: +
| Region | Start | End |
| gene | 589285 | 593285 |
| mRNA | 589285 | 593285 |
| exon | 589285 | 589718 |
| exon | 591508 | 591767 |
| exon | 591948 | 592067 |
| exon | 592154 | 592324 |
| exon | 592540 | 593285 |
| CDS | 589601 | 589718 |
| CDS | 591508 | 591767 |
| CDS | 591948 | 592067 |
| CDS | 592154 | 592324 |
| CDS | 592540 | 593232 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03092.15 | BT1 | 40 | 140 |
| PF03092.15 | BT1 | 191 | 383 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.