PH01000128G0770's details annotation
1.Annotation
ICBR annotation: OsPOP4 - Putative Prolyl Oligopeptidase homologue, expressed
Blast result AT2G23620 : 4.10E-67
Blast annotation: methyl esterase 1
2.Location
Scaffold: PH01000128
Strand: -
| Region | Start | End |
| gene | 637365 | 640185 |
| mRNA | 637365 | 640185 |
| exon | 637365 | 637781 |
| exon | 637963 | 638097 |
| exon | 639780 | 640185 |
| CDS | 637500 | 637781 |
| CDS | 637963 | 638097 |
| CDS | 639780 | 640166 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000310 | Glycine,_serine_and_threonine_metabolism flavin adenine dinucleotide binding, oxidoreductase activity, acting on CH-OH group of donors, Biotin_metabolism oxidation-reduction process, alcohol metabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12697.6 | Abhydrolase_6 | 15 | 255 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.