PH01000130G1160's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G05310 : 3.00E-115
Blast annotation: TLC ATP/ADP transporter
2.Location
Scaffold: PH01000130
Strand: -
| Region | Start | End |
| gene | 787206 | 797591 |
| mRNA | 787206 | 797591 |
| exon | 787206 | 787676 |
| exon | 788122 | 788178 |
| exon | 788539 | 788619 |
| exon | 791585 | 791716 |
| exon | 792710 | 792961 |
| exon | 793243 | 793450 |
| exon | 793773 | 793875 |
| exon | 793974 | 794070 |
| exon | 794160 | 794228 |
| exon | 794583 | 794681 |
| exon | 795511 | 795675 |
| exon | 795752 | 797591 |
| CDS | 787533 | 787676 |
| CDS | 788122 | 788178 |
| CDS | 788539 | 788619 |
| CDS | 791585 | 791716 |
| CDS | 792710 | 792961 |
| CDS | 793243 | 793450 |
| CDS | 793773 | 793875 |
| CDS | 793974 | 794070 |
| CDS | 794160 | 794228 |
| CDS | 794583 | 794681 |
| CDS | 795511 | 795675 |
| CDS | 795752 | 795868 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.