PH01000134G1270's details annotation
1.Annotation
ICBR annotation: DUF1295 domain containing protein, putative, expressed
Blast result AT1G73650 : 6.00E-110
Blast annotation: Protein of unknown function (DUF1295)
2.Location
Scaffold: PH01000134
Strand: -
| Region | Start | End |
| gene | 762714 | 769084 |
| mRNA | 762714 | 769084 |
| exon | 762714 | 763124 |
| exon | 763377 | 763438 |
| exon | 763534 | 763662 |
| exon | 764069 | 764302 |
| exon | 764401 | 764482 |
| exon | 764901 | 764962 |
| exon | 765808 | 765875 |
| exon | 766032 | 766101 |
| exon | 766241 | 766603 |
| exon | 766712 | 769084 |
| CDS | 762998 | 763124 |
| CDS | 763377 | 763438 |
| CDS | 763534 | 763662 |
| CDS | 764069 | 764302 |
| CDS | 764401 | 764482 |
| CDS | 764901 | 764962 |
| CDS | 765808 | 765875 |
| CDS | 766032 | 766101 |
| CDS | 766241 | 766603 |
| CDS | 766712 | 767146 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06966.11 | DUF1295 | 273 | 501 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005737 | cytoplasm |
| GO:0006629 | lipid metabolic process |
| GO:0016021 | integral to membrane |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.