PH01000140G1180's details annotation
1.Annotation
ICBR annotation: helicase conserved C-terminal domain containing protein, expressed
Blast result AT5G01710 : 4.00E-139
Blast annotation: methyltransferases
2.Location
Scaffold: PH01000140
Strand: -
| Region | Start | End |
| gene | 894215 | 896911 |
| mRNA | 894215 | 896911 |
| exon | 894215 | 895998 |
| exon | 896741 | 896911 |
| CDS | 894632 | 895998 |
| CDS | 896741 | 896762 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08241.11 | Methyltransf_11 | 92 | 154 |
| PF05050.11 | Methyltransf_21 | 276 | 422 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.