Gene details

Annotation of co-expression genes

PH01000141G1400's details annotation

1.Annotation

ICBR annotation: signal recognition particle 72 kDa protein, putative, expressed

Blast result AT1G67680 : 1.00E-177
Blast annotation: SRP72 RNA-binding domain

2.Location

Scaffold: PH01000141
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000420	Protein_export defense response, signal recognition particle, 7S RNA binding, ADP_binding SRP-dependent cotranslational protein targeting to membrane, G2-like Transcription_Regulator(from PlantTFDB) GARP-G2-like Transcription_Regulator(from iTAK)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Protein export	signal recognition particle subunit SRP72	ko03060	K03108

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding
GO:0006614	SRP-dependent cotranslational protein targeting to membrane
GO:0008312	7S RNA binding
GO:0048500	signal recognition particle

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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