PH01000142G0150's details annotation
1.Annotation
ICBR annotation: CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000142
Strand: +
| Region | Start | End |
| gene | 81495 | 86467 |
| mRNA | 81495 | 86467 |
| exon | 81495 | 83181 |
| exon | 85397 | 85471 |
| exon | 85518 | 85598 |
| exon | 85942 | 86016 |
| exon | 86298 | 86467 |
| CDS | 82810 | 83181 |
| CDS | 85397 | 85471 |
| CDS | 85518 | 85598 |
| CDS | 85942 | 86016 |
| CDS | 86298 | 86303 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.