PH01000142G1490's details annotation
1.Annotation
ICBR annotation: phosphatidylinositol-4-phosphate 5-kinase, putative, expressed
Blast result AT1G21980 : 2.00E-100
Blast annotation: phosphatidylinositol-4-phosphate 5-kinase 1
2.Location
Scaffold: PH01000142
Strand: +
| Region | Start | End |
| gene | 989472 | 994591 |
| mRNA | 989472 | 994591 |
| exon | 989472 | 991123 |
| exon | 991415 | 991478 |
| exon | 991581 | 991691 |
| exon | 991767 | 991960 |
| exon | 992044 | 992174 |
| exon | 992251 | 992344 |
| exon | 993204 | 994591 |
| CDS | 990804 | 991123 |
| CDS | 991415 | 991478 |
| CDS | 991581 | 991691 |
| CDS | 991767 | 991960 |
| CDS | 992044 | 992174 |
| CDS | 992251 | 992344 |
| CDS | 993204 | 993510 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01504.17 | PIP5K | 127 | 400 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016307 | phosphatidylinositol phosphate kinase activity |
| GO:0046488 | phosphatidylinositol metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.