PH01000146G1260's details annotation
1.Annotation
ICBR annotation: 14-3-3 protein, putative, expressed
Blast result AT4G24210 : 5.40E-25
Blast annotation: F-box family protein
2.Location
Scaffold: PH01000146
Strand: -
| Region | Start | End |
| gene | 877208 | 878755 |
| mRNA | 877208 | 878755 |
| exon | 877208 | 878755 |
| CDS | 878016 | 878663 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00646.32 | F-box | 75 | 115 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Plant hormone signal transduction | F-box protein GID2 | ko04075 | K14495 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.