PH01000147G1250's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G04020 : 1.60E-52
Blast annotation: -
2.Location
Scaffold: PH01000147
Strand: -
| Region | Start | End |
| gene | 824107 | 828229 |
| mRNA | 824107 | 828229 |
| exon | 824107 | 824582 |
| exon | 824775 | 824875 |
| exon | 825076 | 825158 |
| exon | 825304 | 825488 |
| exon | 825590 | 825643 |
| exon | 825758 | 825844 |
| exon | 826121 | 826243 |
| exon | 826325 | 828229 |
| CDS | 824364 | 824582 |
| CDS | 824775 | 824875 |
| CDS | 825076 | 825158 |
| CDS | 825304 | 825488 |
| CDS | 825590 | 825643 |
| CDS | 825758 | 825844 |
| CDS | 826121 | 826243 |
| CDS | 826325 | 826516 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.