PH01000149G1190's details annotation
1.Annotation
ICBR annotation: cytochrome P450, putative, expressed
Blast result AT3G19270 : 2.00E-170
Blast annotation: cytochrome P450, family 707, subfamily A, polypeptide 4
2.Location
Scaffold: PH01000149
Strand: +
| Region | Start | End |
| gene | 843547 | 848065 |
| mRNA | 843547 | 848065 |
| exon | 843547 | 844011 |
| exon | 844188 | 844506 |
| exon | 844636 | 844788 |
| exon | 844930 | 845268 |
| exon | 845424 | 845502 |
| exon | 845649 | 845755 |
| exon | 846396 | 846514 |
| exon | 846807 | 848065 |
| CDS | 843800 | 844011 |
| CDS | 844188 | 844506 |
| CDS | 844636 | 844788 |
| CDS | 844930 | 845268 |
| CDS | 845424 | 845502 |
| CDS | 845649 | 845755 |
| CDS | 846396 | 846514 |
| CDS | 846807 | 846966 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00067.21 | p450 | 41 | 453 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Carotenoid biosynthesis | (+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93] | ko00906 | K09843 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005506 | iron ion binding |
| GO:0009055 | electron carrier activity |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.