PH01000154G0710's details annotation
1.Annotation
ICBR annotation: ZOS3-08 - C2H2 zinc finger protein, expressed
Blast result AT2G29660 : 4.30E-58
Blast annotation: zinc finger (C2H2 type) family protein
2.Location
Scaffold: PH01000154
Strand: -
| Region | Start | End |
| gene | 431495 | 435917 |
| mRNA | 431495 | 435917 |
| exon | 431495 | 435917 |
| CDS | 432837 | 434138 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000997 | oligosaccharide metabolic process, GH63 Glycoside_Hydrolases cell wall, cell wall modification, mannosyl-oligosaccharide glucosidase activity, CE8 Carbohydrate_Esterases N-Glycan_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | C2H2 |
| Transcription_Regulator(from PlantTFDB) | C2H2 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003950 | NAD+ ADP-ribosyltransferase activity |
| GO:0008270 | zinc ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.