PH01000155G0840's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G69380 : 4.00E-105
Blast annotation: Protein of unknown function (DUF155)
2.Location
Scaffold: PH01000155
Strand: +
| Region | Start | End |
| gene | 537046 | 542795 |
| mRNA | 537046 | 542795 |
| exon | 537046 | 538442 |
| exon | 538632 | 538743 |
| exon | 538907 | 539066 |
| exon | 539511 | 539659 |
| exon | 539780 | 539931 |
| exon | 541325 | 541439 |
| exon | 541536 | 542795 |
| CDS | 538135 | 538442 |
| CDS | 538632 | 538743 |
| CDS | 538907 | 539066 |
| CDS | 539511 | 539659 |
| CDS | 539780 | 539931 |
| CDS | 541325 | 541439 |
| CDS | 541536 | 541673 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02582.13 | DUF155 | 154 | 324 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.