PH01000155G1560's details annotation
1.Annotation
ICBR annotation: CSLC1 - cellulose synthase-like family C, expressed
Blast result AT4G07960 : 0
Blast annotation: Cellulose-synthase-like C12
2.Location
Scaffold: PH01000155
Strand: -
| Region | Start | End |
| gene | 989129 | 994085 |
| mRNA | 989129 | 994085 |
| exon | 989129 | 990654 |
| exon | 991704 | 991817 |
| exon | 991914 | 992204 |
| exon | 992302 | 992610 |
| exon | 993272 | 994085 |
| CDS | 990031 | 990654 |
| CDS | 991704 | 991817 |
| CDS | 991914 | 992204 |
| CDS | 992302 | 992610 |
| CDS | 993272 | 993628 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT2 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13641.5 | Glyco_tranf_2_3 | 107 | 339 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.