PH01000158G0130's details annotation
1.Annotation
ICBR annotation: lung seven transmembrane domain containing protein, putative, expressed
Blast result AT1G72480 : 6.00E-146
Blast annotation: Lung seven transmembrane receptor family protein
2.Location
Scaffold: PH01000158
Strand: +
| Region | Start | End |
| gene | 88884 | 93078 |
| mRNA | 88884 | 93078 |
| exon | 88884 | 90094 |
| exon | 90203 | 91157 |
| exon | 91239 | 91334 |
| exon | 91855 | 91991 |
| exon | 92097 | 92183 |
| exon | 92881 | 93078 |
| CDS | 89913 | 90094 |
| CDS | 90203 | 91157 |
| CDS | 91239 | 91334 |
| CDS | 91855 | 91991 |
| CDS | 92097 | 92183 |
| CDS | 92881 | 93070 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06814.12 | Lung_7-TM_R | 169 | 455 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.